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ont-sequencing

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KingLouis237 / Barcode

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A transparent ONT bacterial assembly case study for an *Acinetobacter* barcode07 isolate, built not only to generate an assembly, but to show how raw reads become an interpretable genome through QC evidence, assembler comparison, graph checks, phylogeny, annotation, documented decisions, and honest limitations.

python reproducible-research bioinformatics-pipeline phylogenetics kegg-pathway genome-assembly kat bandage 16s-rrna nanopore-sequencing busco long-read-sequencing quast flye iqtree acinetobacter workflow-documentation bacterial-genomics ont-sequencing
  • Updated Mar 26, 2026
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