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13 changes: 13 additions & 0 deletions .github/workflows/zenodo-archive.yml
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name: Archive release to Zenodo

on:
release:
types: [published]

jobs:
archive:
uses: virtualcell/zenodo-maint/.github/workflows/archive.reusable.yml@v1
with:
tag: ${{ github.event.release.tag_name }}
secrets:
ZENODO_TOKEN: ${{ secrets.ZENODO_TOKEN }}
10 changes: 10 additions & 0 deletions .github/workflows/zenodo-drift.yml
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name: Zenodo drift check

on:
schedule:
- cron: '0 12 * * 1'
workflow_dispatch: {}

jobs:
drift:
uses: virtualcell/zenodo-maint/.github/workflows/drift.reusable.yml@v1
28 changes: 28 additions & 0 deletions .zenodo.json
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{
"upload_type": "software",
"title": "pyvcell",
"license": "mit",
"creators": [
{
"name": "Schaff, James C.",
"affiliation": "University of Connecticut School of Medicine",
"orcid": "0000-0003-3286-7736"
},
{
"name": "Patrie, Alexander",
"affiliation": "University of Connecticut School of Medicine",
"orcid": "0009-0002-6886-2291"
},
{
"name": "Drescher, Logan",
"affiliation": "University of Connecticut School of Medicine"
},
{
"name": "Moraru, Ion I.",
"affiliation": "University of Connecticut School of Medicine",
"orcid": "0000-0002-3746-9676"
}
],
"description": "<p>pyvcell is the Python wrapper for Virtual Cell (VCell) modeling and simulation — local scripting of spatial modeling, simulation, data analysis, and visualization, plus access to the Virtual Cell remote APIs. Supports VCML and SBML import/export.</p>",
"related_identifiers": []
}
23 changes: 23 additions & 0 deletions CITATION.cff
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cff-version: 1.2.0
message: "If you use this software, please cite it using these metadata."
title: "pyvcell"
type: software
repository-code: "https://github.com/virtualcell/pyvcell"
license: MIT
doi: 10.5281/zenodo.21127437 # concept DOI (all versions)
authors:
- family-names: "Schaff"
given-names: "James C."
affiliation: "University of Connecticut School of Medicine"
orcid: "https://orcid.org/0000-0003-3286-7736"
- family-names: "Patrie"
given-names: "Alexander"
affiliation: "University of Connecticut School of Medicine"
orcid: "https://orcid.org/0009-0002-6886-2291"
- family-names: "Drescher"
given-names: "Logan"
affiliation: "University of Connecticut School of Medicine"
- family-names: "Moraru"
given-names: "Ion I."
affiliation: "University of Connecticut School of Medicine"
orcid: "https://orcid.org/0000-0002-3746-9676"
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