Release 4.4

What's Changed

• read return value log from the begining of the output file by @axlbonnet in #141
• use logback to limit log size + tests by @axlbonnet in #142

Full Changelog: v4.3...v4.4

War is available on https://vip.creatis.insa-lyon.fr:9007/nexus/

Release 4.3

What's Changed

• Fix script.sh when running within a venv by @ngeorges-cnrs in #135
• Rest error by @gwen-creatis in #136

New Contributors

• @gwen-creatis made their first contribution in #136

Full Changelog: v4.2...v4.3

War is available on https://vip.creatis.insa-lyon.fr:9007/nexus/

Release 4.2

What's Changed

• Add output subdirs by @ngeorges-cnrs in #125
• Container are nammed with the workflow id (for Docker) by @hippolyteblot in #127
• Add --no-pull on bosh exec launch by @ngeorges-cnrs in #130
• add force option on terminate() by @ethaaalpha in #126
• set containers.runtime mandatory by @ethaaalpha in #128
• update logger by @ethaaalpha in #129

New Contributors

• @hippolyteblot made their first contribution in #127

Full Changelog: v4.1...v4.2

War is available on https://vip.creatis.insa-lyon.fr:9007/nexus/

Release 4.1

Version 4.0 is the major version relying on the new static bash script and getting rid of legacy velocity scripts.
Version 4.1 includes minor improvements and bugfixes.

What's Changed

• migration to hibernate core by @ethaaalpha in #76
• fix hibernate cfg file by @ethaaalpha in #86
• Add singularityPath by @ngeorges-cnrs in #88
• Update script.sh by @ngeorges-cnrs in #87
• better parse times in gasw output by @axlbonnet in #89
• fix enum hibernate by @ethaaalpha in #91
• Bugfix stripext girder by @axlbonnet in #94
• script.sh refactoring by @ngeorges-cnrs in #90
• new constructor in gasw-exception by @ethaaalpha in #95
• jobname and output by @ethaaalpha in #92
• Add --stream flag to bosh exec launch by @ngeorges-cnrs in #96
• correct downloads iteration by @axlbonnet in #97
• Remove "time" usage in script.sh by @ngeorges-cnrs in #98
• Fix per-job provenance file matching, cleanup boutiques cache by @ngeorges-cnrs in #99
• do not unzip nifti from shanoir by @axlbonnet in #100
• handle filename in uploads + corrections by @axlbonnet in #101
• add filename in shanoir uploads requests by @axlbonnet in #102
• Fix curl-based Shanoir requests reporting success on partial transfers by @ngeorges-cnrs in #104
• Define HOME when it's not by @ngeorges-cnrs in #107
• Add support for dynamic resource-base settings in script.sh by @ngeorges-cnrs in #105
• adding containers params by @axlbonnet in #108
• shutdown DB last by @axlbonnet in #109
• Singularity overlay directory, support for no container-image by @ngeorges-cnrs in #110
• mount inv + container file template change by @axlbonnet in #111
• cleaning moteur2 by @ethaaalpha in #112
• Add directory download for file and lfn inputs by @ngeorges-cnrs in #113
• Preserve container-options with type=singularity by @ngeorges-cnrs in #117
• Add vip:altContainerOpts by @ngeorges-cnrs in #118
• Fix girder-client installation by @ngeorges-cnrs in #120
• Girder dir and no automounts by @axlbonnet in #121
• adding new sourceScript config property by @ethaaalpha in #119

New Contributors

• @ethaaalpha made their first contribution in #76

Full Changelog: v3.11.4...v4.1

Jar is available on https://vip.creatis.insa-lyon.fr:9007/nexus/

Release 3.11.4

What's Changed

• Hotfix release : correct time parsing by @axlbonnet in #85
• Fix GaswParser with URI + stripExtensions by @ngeorges-cnrs in #93
• Hotfix remove time from velocity scripts by @axlbonnet in #103
• Define HOME when it's not by @ngeorges-cnrs in #106

Full Changelog: v3.11.0...v3.11.4

Packages available on : https://vip.creatis.insa-lyon.fr:9007/nexus/
Jar link : https://vip.creatis.insa-lyon.fr:9007/nexus/repository/releases/fr/insalyon/creatis/gasw/3.11.4/gasw-3.11.4.jar

Release 3.11.0

What's Changed

• Moteurlite by @sandepat in #74
• Update shanoir download by @axlbonnet in #75
• update provenance parsing with native python by @axlbonnet in #78
• correct variables templates + remove velocity.log by @axlbonnet in #79

Full Changelog: v3.10.0...v3.11.0

Packages available on : https://vip.creatis.insa-lyon.fr:9007/nexus/
Jar link : https://vip.creatis.insa-lyon.fr:9007/nexus/repository/releases/fr/insalyon/creatis/gasw/3.11.0/gasw-3.11.0.jar

Release 3.10.0

What's Changed

• save provenance file + save download uri by @axlbonnet in #63
• doing several attempts for shanoir downloads by @axlbonnet in #64
• Increase path size in db to store long URIs by @axlbonnet in #65
• rename datasetId into resourceId for shanoir by @axlbonnet in #66
• add ci and correct tests by @axlbonnet in #67
• correct ci yaml by @axlbonnet in #68

Full Changelog: v9.0.1...v3.10.0

Packages available on : https://vip.creatis.insa-lyon.fr:9007/nexus/
Jar link : https://vip.creatis.insa-lyon.fr:9007/nexus/repository/releases/fr/insalyon/creatis/gasw/3.10.0/gasw-3.10.0.jar

Release 3.9.1

Includes :

• #50 : automatic nifti unzip for shanoir nifti download
• #51 : safeguard to support the case when jobs goes straight on the COMPLETED status without queud or running states
• #52 : support for stripped extensions boutiques feature in application outputs (clap @SandeshPatilCreatis )
• #54 : experimental support for gfal (clap @SandeshPatilCreatis )

Available on https://vip.creatis.insa-lyon.fr:9007/nexus/

Release 3.8.0

Includes :

• #41 : update udocker version format
• #44 : add Dirac DELETE status (to allow dirac to delete waiting jobs)

Improvements for FLI-IAM ( thansk to @alaeessaki ) :

• #38 and #43 : shanoir interoperability for inputs and outputs
• #42 : support local application

Available on https://vip.creatis.insa-lyon.fr:9007/nexus/

Hotfix 3.7.1

Fix udocker version to avoid issues with the latest udocker versions. (#39 )

Packages available on : https://vip.creatis.insa-lyon.fr:9007/nexus/