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    • lib-hl7v2-bumblebee

      Public
      The lib-hl7v2-bumblebee library takes an HL7 v2.x message and transforms it into a JSON tree.
      Kotlin
      •
      Other
      •4•1•0•1•Updated Jul 24, 2026Jul 24, 2026

    • Rnssp-rmd-templates

      Public
      Rnssp R Markdown templates are custom-built, parameterized R Markdown templates with seamless integration to the Rnssp R package to enhance user experiences and…
      cdcessencenssp
      cdcessencensspessence-apinssp-cop
      R
      •
      Apache License 2.0
      •12•14•1•0•Updated Jul 24, 2026Jul 24, 2026

    • cfa-dataops

      Public
      Python
      •
      Apache License 2.0
      •1•4•7•4•Updated Jul 24, 2026Jul 24, 2026

    • nccdphp-drh-mmria

      Public
      C#
      •
      GNU General Public License v3.0
      •0•2•7•7•Updated Jul 24, 2026Jul 24, 2026

    • phoenix

      Public
      🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens
      Python
      •
      Apache License 2.0
      •38•109•10•0•Updated Jul 24, 2026Jul 24, 2026

    • dibbs-ecr-refiner

      Public
      The DIBBs eCR Refiner reduces eICR and RR files down to only the most useful, necessary information to alleviate performance and storage burden on eCR data pipe…
      XSLT
      •
      Apache License 2.0
      •4•6•70•9•Updated Jul 24, 2026Jul 24, 2026

    • stimulant_opioid_algorithm_medical_codes_R

      Public
      HTML
      •
      Apache License 2.0
      •3•4•0•0•Updated Jul 24, 2026Jul 24, 2026

    • Opioid_SUD_MHI_MedCodes

      Public
      Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data
      Python
      •8•8•0•0•Updated Jul 23, 2026Jul 23, 2026

    • NEDSS-SystemAdminGuide

      Public
      JavaScript
      •
      Apache License 2.0
      •2•4•0•2•Updated Jul 23, 2026Jul 23, 2026

    • MicrobeTrace

      Public
      The Visualization Multitool for Molecular Epidemiology and Bioinformatics
      bioinformaticsgenomicsphylogenetic-trees
      bioinformaticsgenomicsphylogenetic-treesphylogeneticsepidemiologynetwork-visualizationhivcdcphylogenomicsphylogeny
      TypeScript
      •47•103•212•25•Updated Jul 23, 2026Jul 23, 2026

    • pyrenew-multisignal

      Public
      Python
      •
      Apache License 2.0
      •0•0•16•1•Updated Jul 23, 2026Jul 23, 2026

    • cdc-open-viz

      Public
      CDC OpenViz is a library of React packages for data visualization.
      reactvisualizationdata
      reactvisualizationdatavisualization-library
      TypeScript
      •
      Apache License 2.0
      •29•54•1•6•Updated Jul 23, 2026Jul 23, 2026

    • cfa-stf-routine-forecasting

      Public
      Models and infrastructure for routine forecasting of respiratory disease burden
      Python
      •
      Apache License 2.0
      •4•16•33•6•Updated Jul 23, 2026Jul 23, 2026

    • mira-oxide

      Public
      Rust
      •
      Apache License 2.0
      •1•5•2•3•Updated Jul 23, 2026Jul 23, 2026

    • nhsnlink

      Public
      C#
      •1•2•0•34•Updated Jul 23, 2026Jul 23, 2026

    • cfa-dagster

      Public
      A package to get CFA users running quickly with Dagster on CFA's azure infrastructure.
      Python
      •
      Apache License 2.0
      •1•8•11•1•Updated Jul 23, 2026Jul 23, 2026

    • NEDSS-Modernization

      Public
      Java
      •8•27•0•8•Updated Jul 23, 2026Jul 23, 2026

    • wastewater-informed-covid-forecasting

      Public
      Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub
      R
      •
      Apache License 2.0
      •14•51•7•4•Updated Jul 23, 2026Jul 23, 2026

    • dibbs-ecr-viewer

      Public
      DIBBS eCR Viewer
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •4•13•137•17•Updated Jul 23, 2026Jul 23, 2026

    • cfa-vaccination-coverage-forecasting

      Public
      Python
      •
      Apache License 2.0
      •3•3•0•0•Updated Jul 23, 2026Jul 23, 2026

    • dibbs-ecr-diff

      Public
      Python
      •
      Apache License 2.0
      •0•1•19•5•Updated Jul 23, 2026Jul 23, 2026

    • dibbs-text-to-code

      Public
      Python
      •
      Apache License 2.0
      •3•4•27•5•Updated Jul 23, 2026Jul 23, 2026

    • sirfunctions

      Public
      Key functions used by the SIR team
      R
      •
      Other
      •1•4•24•4•Updated Jul 23, 2026Jul 23, 2026

    • cfa-stf-data

      Public
      Python
      •
      Apache License 2.0
      •0•0•1•0•Updated Jul 23, 2026Jul 23, 2026

    • cfa-cloudops

      Public
      Python
      •
      Apache License 2.0
      •2•2•8•5•Updated Jul 23, 2026Jul 23, 2026

    • sg-monitoring-report

      Public
      Code used for the Surveillance Group monitoring report.
      R
      •
      Apache License 2.0
      •0•0•10•2•Updated Jul 23, 2026Jul 23, 2026

    • NEDSS-Helm

      Public
      This repository is created for NEDSS Helm charts.
      Go Template
      •
      Apache License 2.0
      •7•4•0•4•Updated Jul 23, 2026Jul 23, 2026

    • irma-viz

      Public
      IRMA-Viz is a Rust command-line tool for rendering IRMA report plots
      ncirdncird-idcdc-influenza-division
      ncirdncird-idcdc-influenza-division
      Rust
      •
      Apache License 2.0
      •0•1•0•0•Updated Jul 23, 2026Jul 23, 2026

    • NEDSS-DataReporting

      Public
      Data Near Real Time Reporting micro services for Modernized NBS System
      TSQL
      •
      Apache License 2.0
      •7•3•0•4•Updated Jul 23, 2026Jul 23, 2026

    • cfa-simulator

      Public
      A framework for interactive client-side modeling apps
      TypeScript
      •
      Apache License 2.0
      •0•3•13•2•Updated Jul 23, 2026Jul 23, 2026
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