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    43 repositories

    • cave-helm-charts

      Public
      repository to store helm charts for deploying CAVE services to kubernetes
      Go Template
      •
      MIT License
      •0•1•0•1•Updated Jul 22, 2026Jul 22, 2026

    • CAVEclient

      Public
      This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
      connectomics
      connectomics
      Python
      •
      MIT License
      •16•37•37•18•Updated Jul 22, 2026Jul 22, 2026

    • precomputed_annotation_indices_pipeline

      Public
      Code Ocean pipeline
      Nextflow
      •0•0•0•0•Updated Jul 20, 2026Jul 20, 2026

    • terraform-google-cave

      Public
      A repository to store terraform modules for setting up infrastructure as code for CAVE in google cloud
      HCL
      •
      MIT License
      •0•1•0•1•Updated Jul 20, 2026Jul 20, 2026

    • MaterializationEngine

      Public
      Python
      •
      MIT License
      •5•0•15•15•Updated Jul 20, 2026Jul 20, 2026

    • precomputed_annotation_indices_capsules

      Public
      Code Ocean capsules
      Python
      •0•0•0•0•Updated Jul 17, 2026Jul 17, 2026

    • PyChunkedGraph

      Public
      Data backend for fast proofreading of cell segmentations in connectomics datasets
      Python
      •
      Mozilla Public License 2.0
      •13•27•18•14•Updated Jul 14, 2026Jul 14, 2026

    • SkeletonService

      Public
      Skeleton querying and retrieval service
      Python
      •
      MIT License
      •0•1•1•1•Updated Jul 13, 2026Jul 13, 2026

    • standard_transform

      Public
      Python
      •
      MIT License
      •0•4•0•0•Updated Jul 12, 2026Jul 12, 2026

    • CAVEdeployment

      Public
      Shell
      •
      MIT License
      •7•2•12•4•Updated Jul 11, 2026Jul 11, 2026

    • supervoxel-splitter

      Public
      Python
      •
      MIT License
      •0•2•0•0•Updated Jun 29, 2026Jun 29, 2026

    • PCGL2Cache

      Public
      Level 2 caching system for the PyChunkedGraph
      Python
      •
      GNU General Public License v3.0
      •2•0•2•0•Updated Jun 27, 2026Jun 27, 2026

    • precomputed_annotation_indices

      Public
      Conglomeration of Code Ocean repos that collectively produce indices of precomputed annotations, crucially with an accompanying spatial index
      Nextflow
      •0•0•0•0•Updated Jun 22, 2026Jun 22, 2026

    • nglui

      Public
      Python
      •
      MIT License
      •4•13•11•10•Updated Jun 17, 2026Jun 17, 2026

    • cave-diver

      Public
      CAVE Data Viewer
      TypeScript
      •
      Other
      •0•0•0•0•Updated Jun 8, 2026Jun 8, 2026

    • catalog

      Public
      [WIP] CAVE data catalog
      Python
      •0•0•12•0•Updated May 15, 2026May 15, 2026

    • AnnotationFrameworkInfoService

      Public
      Python
      •
      MIT License
      •0•1•3•4•Updated May 12, 2026May 12, 2026

    • dash-connectivity-viewer

      Public
      visualizationanalysis
      visualizationanalysis
      Python
      •
      Other
      •2•0•0•1•Updated May 6, 2026May 6, 2026

    • AnnotationEngine

      Public
      A flask app rest interface for adding annotations to a cloud volume segmentation
      Python
      •
      MIT License
      •3•3•8•8•Updated May 1, 2026May 1, 2026

    • dash_on_flask

      Public
      Dash on Flask with login_required (and application factory pattern)
      Python
      •
      MIT License
      •124•0•0•2•Updated Apr 29, 2026Apr 29, 2026

    • DynamicAnnotationDB

      Public
      Python
      •
      MIT License
      •1•1•0•4•Updated Apr 28, 2026Apr 28, 2026

    • EMAnnotationSchemas

      Public
      Repository to hold schemas for annotations of volumetric imaging data focused on EM
      Python
      •
      MIT License
      •17•5•0•7•Updated Apr 28, 2026Apr 28, 2026

    • registry

      Public
      [WIP] service implementing a data registry/catalog for the CAVE stack
      Python
      •0•0•0•0•Updated Apr 6, 2026Apr 6, 2026

    • middle_auth

      Public
      Python
      •
      MIT License
      •1•1•0•8•Updated Feb 26, 2026Feb 26, 2026

    • middle_auth_client

      Public
      Python
      •
      MIT License
      •1•0•1•0•Updated Jan 9, 2026Jan 9, 2026

    • local-template

      Public
      Copier template for generating new terraform-based local CAVE clusters
      Shell
      •0•0•0•0•Updated Dec 12, 2025Dec 12, 2025

    • global-template

      Public
      Copier template for generating new terraform-based global clusters
      Shell
      •0•0•0•0•Updated Dec 12, 2025Dec 12, 2025

    • CAVEColab

      Public
      Repository for notebooks and artifacts to help assist in setting up a google colab to work with CAVE based data access.
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Oct 10, 2025Oct 10, 2025

    • MeshParty

      Public
      visualizationanalysis
      visualizationanalysis
      Python
      •
      Apache License 2.0
      •19•43•19•8•Updated Sep 1, 2025Sep 1, 2025

    • uwsgi_prometheus_workers

      Public
      A simple python application to convert uwsgi stats to a prometheus metric for scaling
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 4, 2025Jul 4, 2025
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