4.2

Last release before necessary dependency and Python version updates.

Included are many bug fixes, cleanups, and documentation improvements, as well as several new physics capabilities, analysis options, and framework enhancements.

What's Changed

• Fix Etot bug and add comments for clarity. by @LeanderFischer in #741
• fixed small bug in fit_scipy by @BenSmithers in #742
• Derived Parameters in CFG files by @BenSmithers in #729
• Detector class bug fixes by @JanWeldert in #743
• Update README.md by @LeanderFischer in #744
• Fix dependencies and README by @LeanderFischer in #746
• Deprecate argument by @LeanderFischer in #745
• Add densitiy scale by @JanWeldert in #747
• Bump python version by @LeanderFischer in #752
• Implement Neutrino decay in PISA (Prob3) by @anilak41 in #748
• Fix dependencies and update install instructions by @LeanderFischer in #753
• Clarify that poissonLLH in likelihood_functions.py does not take into… by @finnmayhew in #755
• Re-shaped the mod_chi2's return to match the input shape by @JKrishnamoorthi in #760
• adding DAEMONFLUX stage by @marialiubarska in #761
• Updated local installation instruction by @JKrishnamoorthi in #763
• Addition of LRI potential by @ggarg07 in #762
• Addition of density as a free parameter for tomography by @sc458930 in #764
• Take into account covariance matrix for daemonflux parameters by @marialiubarska in #766
• Update README.md by @LeanderFischer in #767
• Update INSTALL.md by @LeanderFischer in #768
• Update doc files and set up docu workflow to deploy sphinx to gh pages. by @LeanderFischer in #769
• basic example code to get event wise information by @JKrishnamoorthi in #765
• Update README.md by @LeanderFischer in #772
• Update fix_error.py description by @finnmayhew in #776
• Deprecate duplicated prior functions by @JanWeldert in #773
• Stage and pipeline related documentation touch ups by @thehrh in #780
• Update README.md by @LeanderFischer in #781
• adding stage for external osc calc by @philippeller in #756
• fix plotting 2d arrays (not caught by unit tests) by @thehrh in #783
• Remove unimplemented analytical NSI matrix calculation from nsi_param… by @finnmayhew in #786
• Finally fix map.plot, to be actually usable.. by @LeanderFischer in #787
• Update significantly outdated documentation of global constants by @thehrh in #789
• Fix doubly defined report_profile method in stage.py + minor touch-ups by @thehrh in #791
• Make event cutting for EventsPi work also when at least one variable name is conta… by @thehrh in #792
• Apply obvious outstanding fixes to simple_signal and generalized_llh_params services by @thehrh in #793
• Apply small fixes to (mostly) docstrings of config_parser module and extend unit test by @thehrh in #794
• Fix broken links in general conventions guide by @thehrh in #796
• Revive parametric Aeff stage by @JanWeldert in #798
• Clean up imports by services and get rid of unused WHERE constant for smart arrays by @thehrh in #790
• Add link to general PISA conventions in root readme by @thehrh in #805
• Remove obsolete scripts from pisa_tests directory and update entry points in setup.py by @thehrh in #812
• Allow for ultrasurfaces fit results file path relative to pisa resources search paths by @thehrh in #813
• remove fit and minimiser settings in unused and unparsable .cfg format by @thehrh in #820
• Allow reporting timing data for several pipelines at once (from any Detectors or DistributionMaker instance) ... by @thehrh in #822
• make to_file accept simple file name again by @thehrh in #824
• Adding a contributing guide by @JanWeldert in #826
• Service transparency and usability: expected data keys, supported representations, unit tests by @thehrh in #817
• First version of an MCMC sampler by @JanWeldert in #829
• Update release.yml by @philippeller in #837
• Restructure and update installation instructions by @thehrh in #836
• Update install instructions by @JanWeldert in #832
• Fix python test environment setup. by @LeanderFischer in #844
• Enable (in)equality constraints for use with local and global scipy minimizers by @thehrh in #841
• Update discrete systematic README (Ultrasurface use) by @LeanderFischer in #846
• Various documentation touch-ups by @thehrh in #848
• Alternative variable binning approach by @JanWeldert in #849
• update sphinx build config file version string from 4.1 -> 4.2 by @thehrh in #850

New Contributors

• @finnmayhew made their first contribution in #755
• @ggarg07 made their first contribution in #762
• @sc458930 made their first contribution in #764

Full Changelog: 4.1...4.2