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Upgrade FNN workflow to version 1.0.11.0 #6874

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e907d36
Upgrade FNN workflow to version 1.0.11.0
anuprulez May 13, 2026
7567156
Add Intro_To_FNN_v1_0_11_0-test.yml workflow
anuprulez May 13, 2026
1c580d9
Rename workflow file for consistency
anuprulez May 13, 2026
4efc19e
Update shortlinks.yaml
anuprulez May 13, 2026
d00976e
Merge branch 'main' into update-FNN-workflow-tool-versions
anuprulez May 13, 2026
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2 changes: 1 addition & 1 deletion metadata/shortlinks.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -2042,7 +2042,7 @@ id:
W00212: "/topics/single-cell/tutorials/scrna-scanpy-pbmc3k/workflows/Clustering-3k-PBMC-with-Scanpy.html"
W00213: "/topics/single-cell/tutorials/scrna-scater-qc/workflows/main_workflow.html"
W00214: "/topics/statistics/tutorials/CNN/workflows/Intro_To_CNN_v1_0_11_0.html"
W00215: "/topics/statistics/tutorials/FNN/workflows/Intro_To_FNN_v1_0_10_0.html"
W00215: "/topics/statistics/tutorials/FNN/workflows/Intro_To_FNN_v1_0_11_0.html"
W00216: "/topics/statistics/tutorials/RNN/workflows/Intro_To_RNN_v1_0_10_0.html"
W00217: "/topics/statistics/tutorials/aberrant_pi3k_pathway_analysis/workflows/main_workflow.html"
W00218: "/topics/statistics/tutorials/age-prediction-with-ml/workflows/age-prediction-dnam.html"
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2 changes: 1 addition & 1 deletion ...workflows/Intro_To_FNN_v1_0_10_0-test.yml → ...orkflows/Intro_To_FNN_v1_0_11_0-tests.yml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
- doc: Test outline for Intro_To_FNN_v1_0_10_0
- doc: Test outline for Intro_To_FNN_v1_0_11_0
job:
X_test:
class: File
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134 changes: 88 additions & 46 deletions ...s/FNN/workflows/Intro_To_FNN_v1_0_10_0.ga → ...s/FNN/workflows/Intro_To_FNN_v1_0_11_0.ga
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Original file line number Diff line number Diff line change
@@ -1,10 +1,20 @@
{
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"name": "Intro_To_FNN_v1_0_11_0 (imported from uploaded file)",
"report": {
"markdown": "\n# Workflow Execution Report\n\n## Workflow Inputs\n```galaxy\ninvocation_inputs()\n```\n\n## Workflow Outputs\n```galaxy\ninvocation_outputs()\n```\n\n## Workflow\n```galaxy\nworkflow_display()\n```\n"
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"annotation": "",
Expand All @@ -22,8 +32,8 @@
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"tool_state": "{\"optional\": false, \"tag\": null}",
Expand All @@ -49,8 +59,8 @@
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Expand All @@ -76,8 +86,8 @@
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Expand All @@ -103,8 +113,8 @@
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Expand All @@ -116,7 +126,7 @@
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Expand All @@ -130,27 +140,28 @@
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Expand All @@ -159,7 +170,12 @@
"output_name": "outfile"
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"name": "Create deep learning model",
"outputs": [
Expand All @@ -169,27 +185,28 @@
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"errors": null,
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"input_connections": {
Expand All @@ -206,7 +223,20 @@
"output_name": "output"
}
},
"inputs": [],
"inputs": [
{
"description": "runtime parameter for tool Deep learning training and evaluation",
"name": "experiment_schemes"
},
{
"description": "runtime parameter for tool Deep learning training and evaluation",
"name": "input_options"
},
{
"description": "runtime parameter for tool Deep learning training and evaluation",
"name": "input_options"
}
],
"label": null,
"name": "Deep learning training and evaluation",
"outputs": [
Expand All @@ -220,27 +250,28 @@
}
],
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"errors": null,
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"input_connections": {
Expand All @@ -253,7 +284,16 @@
"output_name": "output"
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},
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"name": "Model Prediction",
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Expand All @@ -263,19 +303,20 @@
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Expand Down Expand Up @@ -314,8 +355,8 @@
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Expand All @@ -325,8 +366,9 @@
"owner": "bgruening",
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Expand All @@ -338,6 +380,6 @@
"ml",
"fnn"
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"uuid": "1f06d343-4382-4e9a-aad7-abbf6ff494ca",
"version": 1
}
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