All issues

Search results

--dev-output-candidates results in non-unique filenames

Status: Open.

#610 In fritzsedlazeck/Sniffles;

· LynnLy opened on Jul 8, 2026

minsvlen parameter does not work as expected

bug

Status: Open.

#609 In fritzsedlazeck/Sniffles;

· biorococo opened on Jun 15, 2026

Insertions lack the expected inserted sequence in the ALT field

Status: Open.

#608 In fritzsedlazeck/Sniffles;

· biorococo opened on Jun 15, 2026

KeyError: 'SINGLE_LEFT' during force calling

bug

Status: Open.

#607 In fritzsedlazeck/Sniffles;

· erickarlins opened on May 14, 2026

Brand New User Question. Having trouble using Sniffles2 to find inversion differences between two individuals. Help?

Status: Open.

#605 In fritzsedlazeck/Sniffles;

· NateHanby opened on Apr 11, 2026

Sniffles2 calls unrealistically large deletions (>60 Mb) with PASS filter in clinical WGS

Status: Open.

#603 In fritzsedlazeck/Sniffles;

· enes-ak opened on Mar 30, 2026

strand information for intra-chrom translocation

Status: Open.

#601 In fritzsedlazeck/Sniffles;

· NabilAsyraf98 opened on Jan 6, 2026

Massive unrealistic DUP in Sniffles 2.7 output

Status: Open.

#600 In fritzsedlazeck/Sniffles;

· Dario-Galanti opened on Dec 19, 2025

clarification of coverage in Sniffles2 VCF

Status: Open.

#598 In fritzsedlazeck/Sniffles;

· svedwards opened on Nov 16, 2025

Pooled samples and mosaic option

Status: Open.

#590 In fritzsedlazeck/Sniffles;

· SheepwormJM opened on Oct 7, 2025

Support for MATEID when reporting breakends with known mates?

enhancement

Status: Open.

#589 In fritzsedlazeck/Sniffles;

· roland-ewald opened on Sep 29, 2025

·  

2.8

Parameter suggestions for Sniffles to detect transposable elements from ONT data

Status: Open.

#578 In fritzsedlazeck/Sniffles;

· amarkez opened on Aug 13, 2025