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  1. SPAdes-for-Windows SPAdes-for-Windows Public

    Native-Windows build of the SPAdes genome assembler - fully static, no WSL/Docker/VM. Patch + POSIX shim + one-click installer.

    PowerShell 1

  2. Flye-for-Windows Flye-for-Windows Public

    A native-Windows build of the Flye long-read genome assembler — no WSL, no Docker, no Cygwin, no Linux VM. A one-click installer, a point-and-click GUI, and .exes that run on a stock Windows 10/11 …

    Python 1

  3. Bakta-for-Windows Bakta-for-Windows Public

    Native-Windows port of Bakta bacterial genome annotation + its full tool stack (AMRFinderPlus, Infernal, HMMER, tRNAscan-SE, Aragorn, PilerCR) - no WSL/Docker. One-click installer, GUI, statically-…

    Perl