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Errors when running the scatlas generation pipeline

Status: Open.

#31 In EBISPOT/scatlas_ontology;

· pcm32 opened on Jul 26, 2022

Generate graph showing Makefile build path

Status: Open.

#27 In EBISPOT/scatlas_ontology;

· dosumis opened on Apr 29, 2022

Ensure scao has complete part_of chains

Status: Open.

#20 In EBISPOT/scatlas_ontology;

· dosumis opened on Nov 30, 2021

immune cell type hierarchy is fragmented due to import of BTO cell type terms

Status: Open.

#9 In EBISPOT/scatlas_ontology;

· dosumis opened on Jan 23, 2020

SPARQL query not robust with regards to broken IRI

Status: Open.

#8 In EBISPOT/scatlas_ontology;

· S2Ola opened on Oct 29, 2019

Create the documentation file

Status: Open.

#7 In EBISPOT/scatlas_ontology;

· S2Ola opened on Oct 21, 2019

OMIT has Unsatisfiable classes

Status: Open.

#6 In EBISPOT/scatlas_ontology;

· S2Ola opened on Oct 18, 2019

Auto-generate the catalog file

Status: Open.

#5 In EBISPOT/scatlas_ontology;

· S2Ola opened on Oct 18, 2019

Terms missing from ontology

Status: Open.

#4 In EBISPOT/scatlas_ontology;

· S2Ola opened on Oct 16, 2019

Zoomage file messed up

Status: Open.

#3 In EBISPOT/scatlas_ontology;

· S2Ola opened on Oct 16, 2019

Obsolete terms in SCAtlas seeds

Status: Open.

#2 In EBISPOT/scatlas_ontology;

· S2Ola opened on Oct 15, 2019

Orphanet terms are not properly removed

Status: Open.

#1 In EBISPOT/scatlas_ontology;

· S2Ola opened on Oct 15, 2019