Remove b37 dna

[Istaisa]

Removes all of the b37 DNA specific code from scripts to simplify with LIMS and transition towards retiring this pipeline.

To test:

• Run a mixed RNA/DNA run from this pipeline, check that it runs correctly and produces the same results as previously.

[SamAnderson27]

I'm happy with these changes, they all make sense.

I've rerun the processing on a newish run using LIMS numbers etc and it seems to have the same output as the original run. Could you please run your comparison script on it to see any differences between the folders?

Here is the file path for the new run:
/data/output/validations/TSO500/260410_A01771_0806_BHH3TKDRX7/TSO500

[Istaisa]

Unfortunately don't have a good comparison script for this especially with the low level calls and stuff. I'd either do some intersects on the filtered vcfs or just upload the new run to SVD staging and compare the variants that get pulled through

[SamAnderson27]

I've checked around 10 samples on the run with their live counterparts and they match up on variants called (a few reads different here and there due to the nature of the pipeline).
Happy for this to be merged into dev when you want 🎆

[Istaisa]

@erikwaskiewicz not sure how this affects the TSO cloud updates but this should be good to go if it doesn't clash with anything