Merge pull request #2 from TanguyBarthelemy/RCMD-check-invalid-file

Rcmd check invalid file

Author: TanguyBarthelemy

.github/workflows/R-CMD-check.yaml

@@ -7,100 +7,63 @@ on:
     branches:
       - develop
       - master
+  workflow_dispatch:
 
 name: R-CMD-check
 
 jobs:
   R-CMD-check:
     runs-on: ${{ matrix.config.os }}
 
-    name: ${{ matrix.config.os-name }}, R ${{ matrix.config.r }}, Java ${{ matrix.config.java }}
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
 
     strategy:
       fail-fast: false
       matrix:
         config:
-          - {os: windows-latest, r: 'release', java: 12, os-name: windows}
-          - {os: windows-latest, r: 'devel', java: 12, os-name: windows}
-          #- {os: windows-latest, r: 'oldrel', java: 12, os-name: windows}
-          - {os: macOS-latest, r: 'release', java: 13, os-name: macos}
-          - {os: macOS-latest, r: 'devel', java: 17, os-name: macos}
-          #- {os: macOS-latest, r: 'oldrel', java: 12, os-name: macos}
-          - {os: windows-latest, r: 'devel', java: 17, os-name: windows}
-          #- {os: ubuntu-20.04, r: 'release', java: 12,os-name: ubuntu}
-          #- {os: ubuntu-20.04, r: 'devel', java: 12,os-name: ubuntu}
-          #- {os: ubuntu-20.04, r: 'release', java: 16,os-name: ubuntu}
+          - {os: macos-latest,   r: 'release'}
+          - {os: macos-latest,   r: 'oldrel-1'}
+          - {os: macos-latest,   r: 'oldrel-2'}
 
-    steps:
-      - uses: actions/checkout@v2
-
-      - uses: actions/setup-java@v4
-        with:
-          distribution: 'zulu'
-          java-version: ${{ matrix.config.java }}
+          - {os: windows-latest,  r: 'devel', http-user-agent: 'release'}
+          - {os: windows-latest,  r: 'release'}
+          - {os: windows-latest,  r: 'oldrel-1'}
+          - {os: windows-latest,  r: 'oldrel-2'}
 
-      - uses: r-lib/actions/setup-r@v2
-        with:
-          r-version: ${{ matrix.config.r }}
+          - {os: ubuntu-latest,  r: 'devel', http-user-agent: 'release'}
+          - {os: ubuntu-latest,  r: 'release'}
+          - {os: ubuntu-latest,  r: 'oldrel-1'}
+          - {os: ubuntu-latest,  r: 'oldrel-2'}
+          - {os: ubuntu-latest,  r: 'oldrel-3'}
 
-      - name: Info
-        run: "bash -c 'java -version && which java && echo $PATH && echo $JAVA_HOME'"
+    env:
+      R_KEEP_PKG_SOURCE: yes
 
-      - name: Setup R Java support
-        if: runner.os != 'Windows'
-        run: "echo export PATH=$PATH > reconf.sh; echo export JAVA_HOME=$JAVA_HOME >> reconf.sh; echo R CMD javareconf >> reconf.sh; sudo bash reconf.sh"
+    steps:
 
-      - name: print effective R version
-        run: version
-        shell: Rscript {0}
+      - uses: actions/checkout@v4
 
       - uses: r-lib/actions/setup-pandoc@v2
 
-      - name: Query dependencies
-        run: |
-          install.packages('remotes')
-          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
-          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
-        shell: Rscript {0}
-
-      - name: Restore R package cache
-        uses: actions/cache@v4
+      - uses: actions/setup-java@v4
         with:
-          path: ${{ env.R_LIBS_USER }}
-          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
-          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
-
-      - name: Install system dependencies
-        if: runner.os == 'Linux'
-        run: |
-          while read -r cmd
-          do
-            eval sudo $cmd
-          done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
-
-      - name: Install system dependencies
-        if: runner.os == 'macOS'
-        run: |
-          brew unlink gettext && brew link --force gettext
-          find /usr -name libintl* -print 2>/dev/null
+          distribution: 'zulu' # See 'Supported distributions' for available options
+          java-version: '17'
 
-     - uses: r-lib/actions/setup-r-dependencies@v2
-       with:
-         extra-packages: any::rcmdcheck
-         needs: check
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+          use-public-rspm: true
 
-      - name: Check
-        env:
-          _R_CHECK_CRAN_INCOMING_REMOTE_: false
-        run: |
-          options(crayon.enabled = TRUE)
-          pkgbuild::check_build_tools(debug = TRUE)
-          rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran", "--no-multiarch", "--run-donttest"), error_on = "warning", check_dir = "check")
-        shell: Rscript {0}
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::rcmdcheck
+          needs: check
 
-      - name: Upload check results
-        if: failure()
-        uses: actions/upload-artifact@main
+      - uses: r-lib/actions/check-r-package@v2
         with:
-          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
-          path: check
+          upload-snapshots: true
+          upload-results: true
+          args: 'c("--no-manual", "--as-cran", "--no-multiarch", "--run-donttest")'
+          error-on: '"warning"'